No, there really is a way to do this but I've only read about it looong ago so I don't know. I think it has something to do with the MIDI Clip Timebase or something VIA the Clip Inspector (Absolute?) and /or I think there is a Prefs/Timeline format option used for film that can be mucked with without incurring stretching.
What Brundlefly was saying may hook into some of that.
If it truly does turns out that this is impossible in Sonar and you convert the MIDI to audio you could still retreive the performance by reversing the conversion (Drag and Drop ARA Audio to MIDI conversion with Melodyne). The audio to MIDI clip won't be an exact duplicate of the original MIDI but if it's simple enough and you use a nice clear synth sound when you render to audio it'll be pretty close (so don't render/record the original MIDI through some fancy, super effected synth/sound... something clear and clean... you can use the new MIDI to go back to your original sound).
You are going have to go through the new MIDI file to do some clean up/correction of doubled notes, missed notes, improperly detected pitches, inaccurate velocities, etc but you can use the audio version as a reference.
Actually if you do TWO audio renders of your original MIDI, one with the original synth sound and all the effects and the second with the super clear sound for the MIDI conversion once you get the clear synth audio file turned into MIDI you can use the audio file with the intended synth and all the FX as you reference as you clean up the MIDI.
Basically load up the synth/effects you used originally on your new MIDI track that you just converted, mute the "clean synth" audio file (you don't need it anymore) and then, because your new active MIDI track has the same settings/sounds/effects as the audio file you created from the ORIGINAL MIDI track, as you clean up the MIDI notes on the new MIDI clip it should match up to the audio file.
Whew... sorry that was a stream of consciousness style attempt at problem solving. In the middle of stuff so hopefully that all makes sense.
Cheers and good luck. If you figure it out please update.