I have had bizarre snap issues before, but found out I had apparently accidentally simply turned it off (Bypass Button - I think), in one of those click something while nodding off in the wee hours moments - and I too couldn't get things lined up on a beat - it was always just a little bit off, until I turned it back on.
Please note that per the documentation - Audiosnap can be turned on or off on a clip by clip basis. Is it possible that when you are looking at settings, you are not noticing the Audiosnap Bypass Button is on/off?
This is from Platinum documentation on AudioSnap (I don't have X1 installed anymore):
"Enabling/disabling AudioSnap You can enable/disable AudioSnap processing on a clip-by-clip basis. Transient markers are always available to be edited, but AudioSnap is not active on a clip unless at least one transient marker has been stretched. By disabling AudioSnap on a clip that has stretched transient markers, you can compare how the clip sounds with and without AudioSnap processing. Disabling AudioSnap can also temporarily free up CPU processing power. To enable or disable AudioSnap 1. Select the audio clips you want to enable/disable AudioSnap on. 2. Do one of the following: >Click the Bypass button in the AudioSnap palette. >Click the Enable check box in the Clip Inspector’s AudioSnap section. AudioSnap is enabled/disabled on the selected audio clips, and transient markers are shown/hidden. Note: AudioSnap is automatically enabled on a clip if you stretch a transient marker on the clip." I have also recently discovered that for some as of yet unresponsive to fixing attempts reason - that despite having 32 GB of memory installed on the computer, if I go to: Control Panel\System and Security\System, it shows that 32 GB of memory is installed, but only about 14.5 GB is available for use. That is a GIANT chunk of memory Windows 'sees' but does not allow me to access. Turns out that about 17 GB of my installed memory is being flagged as "Hardware Reserved" (Resource Monitor). I am in the process of attempting to correct that, but just thought maybe you might want to look in Control Panel\System and Security\System to see how much of your 12 GB of installed memory is available to you (just in case).
Bob Bone