OK. To verify, I just tried applying EQ and compression to the Master track and it did exactly what I wanted it to do. Again, so sorry to have bothered you guys on this. I just should've tried it myself. What made me question it was because when I selected all of the tracks to bounce to a WAV, I noticed that all the channels turned blue, but the Master didn't. That's why I asked, but, again, I should've just tried it.
Thanks all who responded.
JB