I'm sure others have disvovered this too, but I thought I'd share a little tip:
Though I work mostly with rock, pop and folk projects, I often use live cello and violin etc. I record at least stereo, but often record Mid/Side plus room, which makes for 4 audio tracks per performance.
In the past it was a pain to fix any intonation issues a performance might have (even the best guys miss a note or two) - you can't stick autotune on every track separately as they all respond differently depending on the nature of that particular source (different mics and distances) - which causes phasing and chorusing.
Since AUX tracks came out, I just submix all the mics to a track and stick Autotune on that track. Works great.
Ludwig