It's not the switch, but rather software that doesn't re-establish its connection to the reconnected USB port. Your audio interface driver would be the prime suspect (assuming you have a USB-connected interface).
I have similar problems if I use the switch while my VirtualBox VM is open. When I come back to the machine running the VM I have no response from the mouse or keyboard. I have to power off and reboot to recover, losing all my data within the VM. Needless to say, I avoid doing that!
I have not seen the same problem with SONAR. But that's because my audio interface is Firewire rather than USB, and not switched. It's only the USB-connected devices that are affected.
I do have an occasional issue that could conceivably be related. Sometimes after waking my computer from sleep I have no audio at all. Not from SONAR, not from CDs, DVDs or YouTube videos. I mention this because maybe my workaround might apply to your situation. What I do is open the audio interface's UI (in my case Saffire MixControl) and change the buffer size. That wakes up the driver and/or port, probably because it forces a re-initialization.