When eliminating (or adding) modules, it appears you have to do ONE at a time...then the window closes...open it up, hit modules, and [de]-select the next module... Window then closes again, etc..
It would be nice to have the window stay open until you click ALL the choices you want or don't want.
Sometimes I just want a floating transport for instance, and it is a lot of clicks to get to that point.
The only close thing I see is getting ALL the modules back in one swoop...with "reset control bar"