I noticed that X1 just is not closing completely, If I run the Task Manager after I close X1, I can close X1 in the processes, then I can reboot X1 again. I think I can deal with it, but it is not ideal.
One of my VST's might be keeping it from shutting down properly, Emulator X3 or Korg Wavestation, might be the culprit, I'll post if anything new comes up.