In my experience, after recording a bunch of tracks for a while and you hit stop, the virus scanner kicks in and starts scanning the new files.
Since they are 24bit 192 haha, it takes a while.
At the same time, Sonar is trying to spin the disk to read the files to create good wave forms.
And of course, you return to Zero to record second takes of all 200 hundred tracks. :P
So there is an IO backlog. Sonar stops trying to read the files to create the wave forms once you start trying to record again, but you can barely tell. The virus scanner is still scanning so you only record for a few seconds before you get a drop out.
Maybe?
If you disable the virus scanner which can be found here for Windows 8...
Control Panel\System and Security\Action Center
And see if your problem doesn't clear up.
If this proves to be the issue, you can also tell Windows Defender to not monitor the directories in which you save all your Sonar Projects.
See if that helps.