If you are using the normal template, it loads the synth as an Instrument Track. While there is nothing really wrong with this, the MIDI track is locked to the synth audio output. You can't see it, but an Instrument Track is really two tracks integrated into one.
To manipulate the MIDI track output, it must be isolated from the synth.
Don't worry, it's a fairly easy fix.
Going forward, I would recommend inserting your synths and selecting the following options:
MIDI Source Track
First Synth Audio Output (or All Synth Audio Outputs if the synth supports multiple outputs.
Synth Properties Page
Do you have Kontact inserted as a synth?
If so, insert a new MIDI track. Copy/paste the MIDI data from the SI track to that, or drag the SI patterns from the SI GUI to the new MIDI track.
Set the output of this MIDI track to Kontact ( or any synth)
At this point, the pattern should play.
If you get hung up somewhere, let us know where you got stuck.
The key is keeping the MIDI track independent from the synth.