"Easy"? Sorry, no. There is really just one way to make MIDI tracks sound natural: play and record them in real time.
There are tools for randomizing velocities and timing, but - and this is important - live performances, though imperfect, are NOT random. A drummer does not place each hit exactly on the grid, but the extent to which a hit lands before or after the grid isn't random. Same for a saxophone solo, a piano rhythm track, or for each of the 20 violins in an ensemble. Musicians often do not consciously know why they make those decisions, describing it by the vague term "groove".
This presents a serious challenge for the solo composer/recordist, who is not an expert player for every instrument he might want to use in a composition. Even if you are an excellent guitarist, maybe even an excellent keyboardist as well, chances are you know little about tubas, celli or cajóns. However, the answer is the same regardless of your skill level: play each part by hand in real time, even if it takes a few tries to get it right.