Obviously there are no hard rules...
If it sounds good... it is good
All that said, if you have to "massage" the kick THAT much to make it work, (IMO) the source sound isn't right.
Always best to get the sound right (up front) when recording. IOW, A kick drum sound that works in context.
- Good kick drum
- Decent mics that are positioned well
- Decent acoustic space in which to record the drum/s
Recording and mixing acoustic drums is one of the hardest tasks for a home studio (especially true if the engineer is a novice). Read up and arm yourself with some basic knowledge of what mics to use... and where to place them.
Jump in and start recording. The more you record, the better you'll get at all the above.