My answer based on the ACTUAL hypothesis presented.
I would continue working more or less uninterupted.
SONAR currently works awesome for most of the artsy fartsy music dork stuff I do and for the things I WANT to do that SONAR seems to choke on its own [REDACTED] on I just do the work in Reaper.
Ya, I'm pretty pleased with my current setup. I'm actually able to do pretty much any fartball thing that comes into my little fartball brain if I put a little fartball grease into it.
Hooray!