If you're close to the amp, the phase issues (which will be mainly comb filtering) should be pretty negligible due to ratio of source to reflections. Things that make it worse:
- if you're close to a reflective surface such as a wall or hard concrete floor (or any floor)
- the further away your mic is from the amp
- the polar pattern of your mic - an omni is going to pick up more room and maybe more phase detrimental reflections
- etc
If this is the case, a bit of experimentation should see the issue rectified.
I think it's 1ft is 1 ms delay. Comb filtering can occur over a wide range of delays. It's frequency dependent too. Around 1-2ms will really get the top end, and as you increase the delay, you'll hit midrange and finally the low range. Couldn't tell you off the top of my head what delays will do it. So any wall could theoretically affect you noticeably from a pretty decent distance. Now it all comes down to signal to reflection ratio. Fix that and you'll fix your issue - if that's the cause.
More likely though, I'd say it's due to your mic positioning and/or choice of mic.