Yes - he is referring to making sure the audio and midi track inputs and outputs are set properly.
Midi Track: Input - leave as Omni/None Output: set to your desired Soft Synth. IF you want the output to be recorded to a specific midi channel, then set that in the Midi Output Channel drop down, which is immediately under the FX Bin for the midi track. Make sure your associated soft synth is set to the same midi channel (if you set one in the Midi Output Channel drop down), otherwise, Sonar will just use midi channel 1, by default, which is fine for most situations.
Audio Track: Input: Set this to pick up the OUTPUT from your associated soft synth. Output: set to either Master or some other Bus - I do NOT recommend sending directly to audio interface outputs - use a bus or master.
Bob Bone