Thanks for all the replies. I was indeed talking about importing wav files of different sample rates into the same project. I did a test with 2 projects, one at 44.1 and one at 48, and imported samples at 44.1 and 48 into each. They played back exactly the same in both, so as was stated above, seems Sonar does its job, without the user having to think.
Is there any noticeable difference in quality between converting a 44.1 sample up to 48, and converting a 48 sample down to 44.1 ...? None that I could hear in my test but, logically anything ..?