something like that has happened to me a time or two.....
I suspect the culprit to be something has glitched in the underlying OS and not directly related to Sonar..... but it affects the save operation in Sonar....
Anytime the computer starts to act squirrley it's time to quickly cover your butt with a save or in this case a copy to a new project and save..... as soon as I notice my DAW is not acting right I save and restart the complete system from a cold boot. That only takes a few minutes, whereas forging ahead could cost me hours of work.