As Paulo suggested back in post #2, there are issues with cloning Instrument tracks. I recommend you avoid it. It doesn't make sense to clone an Instrument, anyway; an Instrument track is by definition a combination of
one MIDI track,
one audio track and
one soft synth.
If you need a copy of the MIDI pointing to the same synth on which to experiment, split the track first, and clone the MIDI track, only. In that case, though, you'll have to leave the original tracks split because you can't combine two MIDI tracks into one Instrument track.
If you don't want the cloned MIDI track pointing to the same synth, just create new track, and copy the MIDI clip(s) to it.