ok, I tried the following
1. removed both OP-X and OP-X II (and saved/removed the leftover program directory.
2. Reinstalled both as administrator
3. Manually gave "full control" NTFS permissions to the local "users" group on my PC
4. changed the Sonar shortcut to run as administrator
5. Launched Sonar and opened my test project.
6. Set one of my OP-X instances to the non-default patch.
7. Opened up task manager and verified that Sonar.exe and all bitbridge.exe instances are running with elevated permissions.
8. Saved my test project, closed and reopened Sonar.
9. Reopened my test project, all OP-X patches are back to the default.
This sucks. I think I'm going to reach out to SonicProjects and Cakewalk to see what they say.