@FreeFlyBerti,
Quick question - when you have these multiple instances of Kontakt inserted in your projects, are you loading multiple instruments into each instance? Or, is there one instrument loaded into each Kontakt instance? (just curious, wondering if you are using the multi-rack functionality in Kontakt).
Can you also list which instruments you happen to have loaded into these Kontakt instances? I am wondering if there is something there I could try to replicate and look for a workaround (or confirm your workaround), as I too use Kontakt all the time.
Lastly, even though it worked in X2, it is quite possible that the X3 code is properly following the VST specs, but that some tiny discrepancy between how Sonar interpreted something in the VST specs in their X3 changes and how Kontakt code interpreted the specs is causing this error to be seen only when Kontakt is inserted into projects in X3.
Fortunately, the NI folks seem to have decided that they could and would do something at their end to resolve the situation, and that is a good thing.
Hopefully a fix will be along shortly.
Bob Bone