Please elaborate on the plugins this particular project uses.
Also, load up the project in Safe Mode in Sonar, and do not load any plugins. Now see if this continues to occur.
In addition, you can try to load up the project as normally done in Sonar and hit the letter 'E' on your computer keyboard. This will toggle off/on the bypassing of all effects.
With either of the above two things to try, if the project plays fine with no effects, then one or more of them may be failing, and you would need to go through determining which ones are causing these issues.
The most likely place I could point you to is to look for any 32-bit plugins present in a 64-bit install of a Sonar project. Sometimes these do not play nicely together.
Bob Bone