With X1 Expanded I have had this happen a few times. I believe it was corrupt project files, as in every case I had to export the audio, then recreate the song from scratch and import the audio. Major pita when it happens.
If you haven't done the X2a update, then yes - you should do it! Hopefully that will resolve the problem for you.
EDIT: Sorry, I just noticed your problem is "write automation". My problem may have been the same, but it also was not reading any automation either.