On my system Melodyne says this when the Buffersize is set to 128 for low latency (...tracking Guitar with input echo on, having GR or TH2 in the FX bin...)
What I do in this case is:
Go to Edit>Preference>Audio>Driver Settings , open the ASIO panel set the Buffersize to 1024 (512 could also do) click "apply"
then go to: Audio> Sync and Caching and apply the same settings in the file System for Playback I/O and Record Buffer. Click "OK". Done.
Regards