I've gone slightly bonkers trying to implement the suggestions in this thread until I realized as a Home Studio user I don't have access to features like adding Aux buses.
Routing the metronome to the Master bus doesn't work. The metronome is always muted during exports.
Exasperated, I resorted to a "low tech" solution you might say.
I just looped-back one output of my Fast Track Duo to an input of the Fast Track using a 1/4" cable, added a new audio track, armed it for record, and hit record with the metronome set to play on record with everything else muted. This recorded the metronome onto my new audio track.
I mean, it worked.
Btw, the only reason I wanted to do this is because the metronome shaker is superior in sound IMO to the TTS-1 shaker!