The more things you do the better; however, if you don't save the project as a bun file, the audio files that are somewhere in one of your potentially many /audio folders WILL NOT BE SAVED. The .cwp files only --point-- to the .wav files in whatever audio folder they are in.
As to the Export Tracks suggestion, you are still going to have to tell the .cwp where all those files are if you re-open it on a different setup.
I still kinda think that saving the whole thing as a bundle (cwb file) and then burning those bundles to dvd is the way to go. If Roland goes belly up, or my system takes a dump, I still have the Sonar install disks, and can re-install, open the bundle, export the waves, and pull the wavs into Supersonar or whatever. If I open the bundle it will automatically create a new .cwp file which will reference all the wavs. Plus, that is what Cakewalk recommends in their documentation.
But then what if the bundle file gets a scratch on the backup disk? So I think, after ruminating the above posts, that the best thing to do is to:
1. Save-as the .cwp with the bounced synths to a new folder, which will copy all the raw wave files into that new folder
2. export all the tracks WITH EFFECTS to that folder (in case the effects/plugins go missing)
2. save the whole thing as a cwb file to same folder (which in most cases will be easiest way to get back the original project)
4. burn the folder [containing ONE song] to 2 separate DVDs with verify on after write
5. put those DVDs in their own labeled jewel cases, keeping one on site, and the other off-site
The reasoning behind one song per backup is that if the DVD gets damaged, and they do get damaged, you only lose one song, not a bunch.