Not sure this will help but I will give my 2 cents. Usually drop outs are caused by a latency issue or where the computer can't keep up with the information it is trying to process. Good advise in other post, disable services not needed in the background. Run/msconfig, services, check hide all microsoft, then disable all, or all but some you know you need. In General do selective start up, and clear the box in services and start up items, and uncheck what is not needed in the list. For a list of what each is use this site,
http://www.sysinfo.org/startuplist.php.
Other things to be concerned with is the VSTi plug in being used, old SE based plug ins can prioe to 2009 can act up. I assume you starting having the issue when you use the VSTi on that track, along with the other tracks. Not sure how you recording all this, but try and make sure all are at the same rate. Ihad some tracks that were mixed at 48000 and 44100 and I never got it to work correctly. i finally deleted the entire template and started over. I have also ran into issues where I was using different plug ins from different periods, so I went to plug in manager and only allowed the newer Cakewalk plug ins and disabled third party plug ins.
Also go over all the programs on your PC that do auto updates and change then to manual. Try disableing the anti virus, and getting off-line for the recording. run a virus scan in "safe-mode". Many will not be found unless it is done in safe mode. Not being able to get in safe mode usually points to a virus. There is a link out the to download a zip that fixes the registry with ability to start in safe mode. It fixes the registry so that you can boot in safe mode and it is free.
https://support.kaspersky.com/5405.
Free up as much space in the background. If you have a quad core, look in Sonar Edit Preferences, Advanced View, Configuration File, under ThreadSchedulingModule and see that as many cores as you have is entered. In the performance module on the top tool bar should be as many lines as you have cores operating. If you have 4 change it from 0 to 4. You should see 4 bars in the performancemodule now.
One last tip. i am having many crashes with the new X2 Producer, another story. But it is a good idea as you progress in projects to "save", and periodically re-boot Sonar to free up space in memory. Also if you have many tracks not being used at certain points, place them in folders to archive them. And I use bus sends at the mixer view to run many fx plug ins, instead of placing them right in the track. I hope some of this helps.
Best,
Free