Latency is only an issue if you have checked input echo and monitor the recording AFTER it is recorded.
Turn OFF input echo. Of course you will hear latency as all systems add a few Ms as the signal is run through all that conversion and processing. EFXs make it even worse.
PS
Ctrl/shift/Y bypasses all EFX bins
If you have the same Fast track I used to have- then you need to use the
MIX control to blend the input with your computers output. Sonar automaticly adjusts for system latency so that the output will sync with your newly inputed signal. That is what is called direct monitoring which has zero latency.