Hi,
My preference and understanding goes with Bapu here ... you should have the same monitors connected to a video card that can support both ... and I am not sure that I would use a separate/secondary hook up for it ... I would recommend getting a better video card that can handle 2 monitors easily enough ... and yeah, I think that different resolutions will likely overwork the card a lot.
I have not regretted spending on my first "good" (or "great") video card, and spent about $300 dollars for one, but it has been worth it and then some ... (GTX 970 and GTX 760 and a spare GTX 780 that did not like one motherboard) ... and adding 2 monitors has not been an issue, since my mains are both DELL's and they are very similar in totality.
I'm not the expert on this, however, and recommend a quick stop at the Transilvanian Brainfarming Factory and get their view first ... but in general, I do not think the video card can handle separate displays like that unless it is a duo type card, and those cost a lot, still ... and even I do not use those setups that use two cards on the same computer.
Hope this helps