Glad you got it sussed.
I use the internal card for computer sounds, youtube etc., and my external card for audio. Everything works fine.
I have two 23" monitors, so don't have problem juggling windows.
Someone just told me on another thread I should disable my internal garbage sound card, even though he doesn't even know what it is..I don't see the sense. I find it handy to be able to seperate e.g. OS sounds, youtube videos, media playrer, etc., from Sonar etc.
He claimed that it would cause "strange dropouts and glitches due to deferred procedure calls."
Never happened here, so I don't think I'll bother.