I experienced this exact problem yesterday. I had left-click-locks-scroll enabled and a note selected in the inline piano roll. Had zero effect. Is there another factor that I'm missing?
This is in X2, by the way, not X1 like the OP reports.
Also, has anyone seen the mouse cursor completed disappear? I was doing much MIDI note rearranging in the inline piano roll and at one point the cursor totally vanished. I had to stop and restart Sonar to get it back (where it did not disappear for the rest of the day).