Bajan Blue
The more I think about this, I cannot see how one measure then just apply some settings that are at best an educated (admittedly very educated) guess as to what will happen.
So one measure then a suggested set of adjustments must surely have the potential to sound different on different systems??
I'm not sure I understand your question. For every room and set of monitors in that room, you need a custom measurement. However, if Audyssey have done their job right, a follow-up measurement to check the accuracy of the initial measurement should not be necessary. This is something they would have worked out in the testing phase, where I would presume they did indeed to some following measurements do insure their stuff was working. It they did get it right, there'd be no need to make the customer's measurement job more involved (although it might make for improved customer assurance they were getting their money's worth).
As to all the others who responded, thanks. But I still didn't get a single response that gave me a sense of whether what I'm seeing is a misunderstanding on my part or a bug in UI. And it could well be a bug, since this is the sort of thing that most people probably wouldn't notice or worry about if they did, or report the bug if they thought it truly was there. Most folks will probably have largely similar corrections applied in any case, so they wouldn't notice this behavior in the first place.
However, if there are any ARC 2 users out there who have noticeably different corrections applied to two channels, just take a look at the response graphs in the interface and see if it looks like the graphs are correct or that the right and left images are switched. I probably should have asked the question that way in the first place.