I did run the update released today, no love.
I ran some more scans, and an auto scan completed successfully, except it failed on TH3 64 bit. I removed it, and got my Dorroughs (273 plugs now, up from 93). I got the Dorroughs, but suspect I broke TH3, which I paid for an upgrade on.
I still have an issue, but would rather have the Dorroughs than Th3 at this point. (It might be the CW version of TH3 that's broken).